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Footnotes

 (1)
Quoted in [Davies, 2001], page 6
 (2)
[Davies, 2001], page 7
 (3)
[Davies, 2001], page 9. To his credit, Davies also points out some of the shortcomings of these metaphors, and proposes a comparison to the periodic table of the elements in their stead.
 (4)
[Ridley, 1999], p. 7
 (5)
[Ridley, 1999], p. 13
 (6)
[Hawley & Mori, 1999], p.3
 (7)
[Gilbert, 1992]. In Gilbert's defense, the entire article quoted is much more measured than this quote would imply. He does acknowledge there is a lot of work to be done after the sequencing is complete. But his excited rhetoric leaves one with the feeling that this equivocation is only slightly more than a formality.
 (8)
Quoted in [Judson, 1979], p.216
 (9)
See [IHGSC, 2001], p.860, or [Venter et al., 2001]
 (10)
[Venter et al., 2001, p.1346]
 (11)
[Keller, 2000], p. 80. She also credits the great evolutionary biologist Ernst Mayr with coming up with the idea around the same time, presenting it in a contemporaneous, but unpublished, talk.
 (12)
 (13)
See, for example, [Judson, 1979], p. 244, or [Kay, 2000], p.128ff.
 (14)
[Watson & Crick, 1953], p.966. See also [Ephrussi et al., 1953]
 (15)
The actual number is at least 576, if you must know. See [Black, 1998]
 (16)
[Tonegawa, 1983]
 (17)
[Radman et al., 1999] contains a review of evidence for, and possible mechanisms of "adaptive mutability," and [Radman, 1999] describes some of the known mutases.
 (18)
[Delves & Roitt, 2000], p.45
 (19)
[McClintock, 1984]
 (20)
[Shapiro, 1999], p.24 contains a summary and an entertaining figure describing the progress of understanding the lac operon.
 (21)
[Halder et al., 1995]. [Gehring, 1998] contains quite a bit of context for the discovery, as well as further findings about homeobox genes.
 (22)
[Coen, 1999], p.147ff.
 (23)
[Coen, 1999], p.250ff
 (24)
[Shapiro, 1999], p.24
 (25)
[Delbruck, 1949]
 (26)
[Jablonka & Lamb, 1995], p.82ff
 (27)
[Nanney, 1985], [Jablonka & Lamb, 1995], page 86
 (28)
[Nanney, 1985]
 (29)
See, for example, [Ridley, 1999], pp.209-218, [Jablonka & Lamb, 1995], pp.112-118
 (30)
[Morgan et al., 1999], [Sutherland et al., 2000]
 (31)
[Cubas et al., 1999], [Scheid & Paszkowski, 2000]
 (32)
There is an aside to be made here about the inadequacy of classic "information theory" to DNA. Yes, the sequence of DNA base pairs can be construed as information. However, the classic definition of information leaves out detailed analysis of who it is that understands that information. Information is not universally accessible. Given the long and fascinating history of that culture, I regret that I cannot read Chinese. Nonetheless, despite my regret, a page of written Chinese is of no use to me. The way that information theory acknowledges this is to say that we append to the information the program that will allow our universal Turing machine to understand the message. But this presupposes that the system in question can be adequately modeled by such a machine, which is, in the case of a living cell, a highly suspect claim.

Such things as the recipe for cytoplasm and the timing of RNA injection into a developing cell are information in a certain sense, but it is a sense that is unavailable for capture by the classic paradigm of information theory.

 (33)
[Chargaff, 1968], p. 327
 (34)
[Atlan & Koppel, 1990]
 (35)
[McClintock, 1961], also see [Keller, 1983], a delightful scientific biography of McClintock.
 (36)
[Nanney, 1957], [Nanney, 1985]
 (37)
[Rosen, 1960] and [Rosen, 1961]
 (38)
e.g. [Chayen, 1958], [Hershey, 1953]
 (39)
[Wilkie, 1964]
 (40)
[Waddington, 1953], and [Waddington, 1942]
 (41)
[Waddington, 1968]
 (42)
[Hershey, 1953], p.138
 (43)
Ibid., p.138
 (44)
[Chargaff, 1968] p.330
 (45)
The ongoing arguments about when, if ever, is the appropriate moment to deny a woman an abortion don't illuminate much, but they do illustrate this point. The reason no one can agree on a single point is that all such choices are arbitrary. The process is continuous; there are no clear intervals. One point on the continuum is as scientifically defensible as any other.
 (46)
[IHGSC, 2001], p.860

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